| Phage and Phage DNA
Preparation |
 |
Reagents
- NZCYM medium
10g NZ Amine
5g NaCl
1g Casamino acid
5g Bacto- yeast extract
2g MgSO4 . 7H2O
To 1 liter
- NaCl
- PEG (polyethylene glycol)
- SM
0.1 M NaCl
0.05 M TRIS
0.01% gelatin
0.01 M MgSO4
- CsCl
- 0.1 M TRIS pH 8.0
- 5M NaCl
- 1 M MgSO4
- Sevag
Chloroform : Isoamyl alcohol (24:1)
|
|
Method
Phage Culture
- Mix 1 x 1010 E. coli (e.g., K803 -
fresh overnight culture best but not mandatory) with 5 x 107
to 5 x 108 pfu.
- Preadsorb bacteria and phage 15 minutes at 37°C.
- Add into 500 ml NZCYM medium.
- Shake 250 rpm 4-8 hours until cell lysis is maximum.
- Spin out debris for 10 minutes at 5,000 RPM in Sorvall GSA rotor.
- Add 29.2 gm NaCl (1.0 M) to supernate.
- Add 50 gm PEG(10% final w/v); Mix gently 15-20 minutes to dissolve; keep on ice
whenever possible.
- Keep > 2 hrs 4°C to precipitate.
- Spin 5 minutes at 5000 RPM in Sorvall GSA rotor.
- Drain pellet, wipe inside of bottle; work quickly so pellet does
not dry out (and become difficult to resuspend).
- Resuspend in approximately 4 ml SM/250 ml original culture medium.
- Add 0.45 gm CsCl for each 0.55 ml SM + phage.
- Mix gently until CsCl is dissolved.
- Spin 24 hours in Sw 55 Ti, at 39K RPM, at 4°C.
- Remove blue phage band by puncturing tube with needle and
syringe.
- Dialyze CsCl-purified phage in 200 ml 0.1 M TRIS pH 8.0, 50 mM
NaCl, and 1mM Mg++, 2 hours-overnight.
|
|
Phage DNA Isolation
- To the dialyzed phage, add EDTA pH 7.6.0 to 50 mM; SDS to 0.05%, and proteinase K to 100 µg/ml.
Incubate 30 minutes at room temperatue.
- Extract gently with phenol, phenol/sevag, and sevag.
- Dialyze vs. 10 mM TRIS pH 8.0, 0.1 mM EDTA.
|
 |
 |